Genome-resolved long-read sequencing expands known microbial diversity across terrestrial habitats
By Philip Hugenholtz, Mantas Sereika & Mads Albertsen
Metagenomic biodiversity assessment within an offshore wind farm
By Tom Van Der Valk, Liv Kristenssen Stranddorf & Tim Wilms
Soil microbial responses to multiple global change factors as assessed by metagenomics
By Stefan Scheu
Academic and clinical perspectives of metagenome sequencing as a diagnostic tool for infectious disease: an interpretive phenomenological study - BMC Infectious Diseases
By Hannah Trivett, Oyinlola Oyebode & Alistair C. Darby
Evaluating Quantitative Metagenomics for Environmental Monitoring of Antibiotic Resistance and Establishing Detection Limits
By Benjamin C Davis, Peter J Vikesland & Amy Pruden
Tunturi virus isolates and metagenome-assembled viral genomes provide insights into the virome of Acidobacteriota in Arctic tundra soils - Microbiome
By Jenni Hultman, Minna K. Männistö & Tatiana A Demina
Marine Metagenome Mining Reveals Lanthipeptides Colwesin A–C, Exhibiting Novel Ring Topology and Anti-inflammatory Activity
By Liujie Huo & 张友明
A metagenomic perspective on the microbial prokaryotic genome census
By Rekha Seshadri, Nikos Kyrpides & Dongying Wu
Detecting microbial engraftment after FMT using placebo sequencing and culture enriched metagenomics to sort signals from noise
By Jake C. Szamosi, Fiona J Whelan & Josie Libertucci
A metagenomic ‘dark matter’ enzyme catalyses oxidative cellulose conversion
By Clelton A Santos, Bernard Henrissat & Sacha Grisel
Exploring the utility of bioaerosol metagenomics compared to PCRs for swine pathogen surveillance
By Patrick G Halbur, Bryan A Wee & Priscilla F. Gerber
Fairy: fast approximate coverage for multi-sample metagenomic binning
By Yun William Yu, Jim Shaw & William Yu
Prokaryotic cellulase gene clusters derived from 2,305 metagenomes
By Fernando D K Tria & Josip Skejo
Metagenomic detection of protozoan parasites on leafy greens aided by a rapid and efficient DNA extraction protocol
By Brent Dixon, Dele Ogunremi & Sohail Naushad
Metagenome reveals the midgut microbial community of Haemaphysalis qinghaiensis ticks collected from yaks and Tibetan sheep - Parasites & Vectors
By Guo-hua Liu, De-yong Duan & Yin Cheng
Metagenomic estimation of dietary intake from human stool
By Christian Diener, Christine Moissl-Eichinger & Karen Corbin
Metagenome-assembled-genomes recovered from the Arctic drift expedition MOSAiC | Scientific Data
By William Boulton, Asaf Salamov & Igor V. Grigoriev
Metagenome-guided culturomics for the targeted enrichment of gut microbes
By Jeremy Armetta, Troels Holger Vaaben & Simone S Li
Metagenome-assembled microbial genomes (n = 3448) of the oral microbiomes of Tibetan and Duroc pigs | Scientific Data
By Junjie Zhang & Tao Ye
Mapping the metagenomic diversity of the multi-kingdom glacier-fed stream microbiome
By Grégoire Michoud, Massimo Bourquin & Tom Battin
Raiding nature's genetic toolbox for UV-C resistance by functional metagenomics | Scientific Reports
Improving the reporting of metagenomic virome-scale data | Communications Biology
By Wei-Shan Chang, Mang Shi & Etienne Simon-Loriere
DGCNN approach links metagenome-derived taxon and functional information providing insight into global soil organic carbon | npj Biofilms and Microbiomes
By Andrew L. Neal, Anna Paola Carrieri & Ritesh Krishna
Metagenomic analysis of deep-sea bacterial communities in the Makassar and Lombok Straits | Scientific Reports
By Charlie Ester De Fretes, Ocky Karna Radjasa & Dh Ahmad
Rapid species-level metagenome profiling and containment estimation with sylph
By Jim Shaw & William Yu
A multi-modal deep language model for contaminant removal from metagenome-assembled genomes
By Zhenmiao Zhang, Wang Jingjing & Huang Yufen
Strainy: phasing and assembly of strain haplotypes from long-read metagenome sequencing
By Maria S. Frolova, Mikhail Kolmogorov & Mihai Pop
Towards predicting the geographical origin of ancient samples with metagenomic data | Scientific Reports
By J. Víctor Moreno-Mayar, Anna-Sapfo Malaspinas & Hannes Schroeder
Recovery of 1559 metagenome-assembled genomes from the East China Sea's low-oxygen region | Scientific Data
By Changjie Dong, Shujing Liu & Kai Tang
Time-series sewage metagenomics distinguishes seasonal, human-derived and environmental microbial communities potentially allowing source-attributed surveillance
By Agnes Becsei, Patrick Munk & Frederique Pasquali
Benchmarking bacterial taxonomic classification using nanopore metagenomics data of several mock communities | Scientific Data
By Alexander Van Uffelen, Kevin Vanneste & Sigrid De Keersmaecker
Recovery of 240 metagenome-assembled genomes from coastal mariculture environments in South Korea | Scientific Data
By Woo Jun Sul, Hoon Je Seong & Sung Jae Ahn
Non-redundant metagenome-assembled genomes of activated sludge reactors at different disturbances and scales | Scientific Data
By Soheil A. Neshat, Stefan Wuertz & Ezequiel Santillan